Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 INE1-201ENST00000456273 945 ntBASIC16.61■□□□□ 0.25
CDH9Q9ULB4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC133539.2-201ENST00000604757 467 ntBASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AL033527.5-201ENST00000641382 801 ntBASIC16.61■□□□□ 0.25
CDH9Q9ULB4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDH9Q9ULB4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AP003680.1-201ENST00000598970 3660 ntBASIC16.6■□□□□ 0.25
CDH9Q9ULB4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AC134915.1-201ENST00000426461 574 ntBASIC16.6■□□□□ 0.25
CDH9Q9ULB4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH9Q9ULB4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH9Q9ULB4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms