Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 AL109954.1-202ENST00000564051 2148 ntBASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 AC092384.3-202ENST00000564646 2873 ntBASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 RN7SL752P-201ENST00000463779 287 ntBASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 AC010319.3-201ENST00000597028 470 ntBASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPC1L1Q9UHC9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 NUS1P3-201ENST00000423502 862 ntBASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 HLA-K-203ENST00000430151 1046 ntBASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 AC007389.4-201ENST00000454674 793 ntBASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 AC011495.1-201ENST00000498085 584 ntBASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPC1L1Q9UHC9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC126177.1-201ENST00000547829 2218 ntBASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC015936.2-201ENST00000593177 259 ntBASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NPC1L1Q9UHC9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AC013268.4-201ENST00000637413 2228 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AP003680.1-201ENST00000598970 3660 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms