Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 LINC02447-202ENST00000501888 2146 ntBASIC14.86□□□□□ -0.03
CTSFQ9UBX1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 DOC2GP-204ENST00000639052 2548 ntBASIC14.86□□□□□ -0.03
CTSFQ9UBX1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 IGHV3-72-202ENST00000621503 303 ntBASIC14.86□□□□□ -0.03
CTSFQ9UBX1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSFQ9UBX1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.86□□□□□ -0.03
CTSFQ9UBX1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 C8orf49-201ENST00000525043 1968 ntBASIC14.85□□□□□ -0.03
CTSFQ9UBX1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AL512384.1-201ENST00000406683 331 ntBASIC14.85□□□□□ -0.03
CTSFQ9UBX1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 RN7SL399P-201ENST00000471648 279 ntBASIC14.85□□□□□ -0.03
CTSFQ9UBX1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC104596.2-201ENST00000512793 793 ntBASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC132938.2-201ENST00000579188 680 ntBASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 AL591163.1-201ENST00000641757 987 ntBASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSFQ9UBX1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CTSFQ9UBX1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSFQ9UBX1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms