Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDAC6Q9UBN7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AP002414.2-201ENST00000591780 3365 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TTTY23B-201ENST00000442790 549 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 TIMM17BP1-201ENST00000545713 516 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 RAB43P1-201ENST00000561790 589 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AC106886.1-201ENST00000568660 600 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 WFDC1-204ENST00000613603 549 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 MIR8072-201ENST00000614241 80 ntBASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HDAC6Q9UBN7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 MIR1909-201ENST00000411312 80 ntBASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC6Q9UBN7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms