Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CYP39A1Q9NYL5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CYP39A1Q9NYL5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CYP39A1Q9NYL5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 CSF2RBP1-201ENST00000447905 391 ntBASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 FO681548.1-201ENST00000455617 1132 ntBASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 AL583810.1-201ENST00000553344 1045 ntBASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP39A1Q9NYL5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 AC006449.5-201ENST00000610658 2098 ntBASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CYP39A1Q9NYL5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 AC016694.1-201ENST00000434179 700 ntBASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 AP001582.1-201ENST00000525856 295 ntBASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 GNRHR2-203ENST00000581100 1187 ntBASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 AC244669.2-201ENST00000612320 853 ntBASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CYP39A1Q9NYL5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CYP39A1Q9NYL5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CYP39A1Q9NYL5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms