Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 AC091271.1-201ENST00000611877 1162 ntBASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXC10Q9NYD6 PCDHA12-202ENST00000613593 2588 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC069224.1-201ENST00000566372 1715 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 FAM197Y7-201ENST00000432892 766 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 RNA5SP486-201ENST00000515961 83 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC078819.1-201ENST00000547454 765 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC012085.1-201ENST00000548270 765 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AC244093.1-201ENST00000610837 814 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 AHCYP2-201ENST00000430630 1300 ntBASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXC10Q9NYD6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
HOXC10Q9NYD6 NKILA-202ENST00000614771 2598 ntBASIC17.89■□□□□ 0.46
HOXC10Q9NYD6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
HOXC10Q9NYD6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
HOXC10Q9NYD6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HOXC10Q9NYD6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 CD8B2-202ENST00000417670 633 ntBASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 AL606495.2-201ENST00000605867 535 ntBASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 AC138951.2-201ENST00000623455 1161 ntBASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXC10Q9NYD6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC10Q9NYD6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms