Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.8■□□□□ 0.12
TM9SF3Q9HD45 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 KRT8P37-201ENST00000451609 1420 ntBASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AL158212.4-201ENST00000624062 1286 ntBASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AC068418.2-201ENST00000577309 3703 ntBASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM9SF3Q9HD45 AL592424.1-201ENST00000563624 1536 ntBASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 BOLA2P3-201ENST00000404566 256 ntBASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 RPL13P2-201ENST00000440687 659 ntBASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 BTNL10-201ENST00000595971 695 ntBASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 RPSAP52-203ENST00000622976 1023 ntBASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 AC024909.3-201ENST00000611513 2257 ntBASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM9SF3Q9HD45 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM9SF3Q9HD45 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms