Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD8Q9HCK8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 ACTBP8-201ENST00000403258 1108 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CR383656.3-201ENST00000551315 183 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 OR10B1P-201ENST00000601666 907 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 AL358472.3-201ENST00000608147 415 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 AC023141.7-201ENST00000430646 407 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 FAM58BP-201ENST00000439056 645 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 MIR3677-201ENST00000578964 60 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 MIR4472-1-201ENST00000584349 80 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 PCDHB18P-201ENST00000524813 2368 ntBASIC14.32□□□□□ -0.12
CHD8Q9HCK8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHD8Q9HCK8 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 MRPL22P1-201ENST00000505398 616 ntBASIC14.31□□□□□ -0.12
CHD8Q9HCK8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 AL136295.7-201ENST00000619226 1200 ntBASIC14.31□□□□□ -0.12
CHD8Q9HCK8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 AC004837.1-201ENST00000446267 564 ntBASIC14.31□□□□□ -0.12
CHD8Q9HCK8 AL135901.1-201ENST00000451812 333 ntBASIC14.31□□□□□ -0.12
CHD8Q9HCK8 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 AC087289.5-201ENST00000586076 3175 ntBASIC14.31□□□□□ -0.12
CHD8Q9HCK8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD8Q9HCK8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 MIR557-201ENST00000385239 98 ntBASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD8Q9HCK8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms