Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 AC244107.1-201ENST00000442033 332 ntBASIC16.27■□□□□ 0.2
USP29Q9HBJ7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 IGHV3-42-201ENST00000520410 361 ntBASIC16.27■□□□□ 0.2
USP29Q9HBJ7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.27■□□□□ 0.2
USP29Q9HBJ7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP29Q9HBJ7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 TNRC18P2-201ENST00000417666 2714 ntBASIC16.27■□□□□ 0.19
USP29Q9HBJ7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP29Q9HBJ7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 FO538757.1-201ENST00000623083 1397 ntBASIC16.26■□□□□ 0.19
USP29Q9HBJ7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 AC136604.1-201ENST00000418535 575 ntBASIC16.26■□□□□ 0.19
USP29Q9HBJ7 HIST3H2BA-201ENST00000436555 524 ntBASIC16.26■□□□□ 0.19
USP29Q9HBJ7 AC002472.2-201ENST00000442739 958 ntBASIC16.26■□□□□ 0.19
USP29Q9HBJ7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 AL133215.2-201ENST00000609242 977 ntBASIC16.26■□□□□ 0.19
USP29Q9HBJ7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.26■□□□□ 0.19
USP29Q9HBJ7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 TCAF2P1-201ENST00000291129 2421 ntBASIC16.25■□□□□ 0.19
USP29Q9HBJ7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
USP29Q9HBJ7 SPDYE17-201ENST00000412399 783 ntBASIC16.25■□□□□ 0.19
USP29Q9HBJ7 TREML5P-201ENST00000421694 576 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms