Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AC000095.1-201ENST00000603208 874 ntBASIC18.55■□□□□ 0.56
RNF41Q9H4P4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.55■□□□□ 0.56
RNF41Q9H4P4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 FER1L4-210ENST00000615531 5998 ntBASIC18.55■□□□□ 0.56
RNF41Q9H4P4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AC190387.1-201ENST00000551683 408 ntBASIC18.54■□□□□ 0.56
RNF41Q9H4P4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF41Q9H4P4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 CRB3P1-201ENST00000449338 276 ntBASIC18.53■□□□□ 0.56
RNF41Q9H4P4 RN7SL399P-201ENST00000471648 279 ntBASIC18.53■□□□□ 0.56
RNF41Q9H4P4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 API5-211ENST00000534695 560 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 AC105250.1-201ENST00000509378 2057 ntBASIC18.53■□□□□ 0.56
RNF41Q9H4P4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF41Q9H4P4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF41Q9H4P4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms