Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ELK2AP-201ENST00000392510 1007 ntBASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 AL645937.2-201ENST00000396808 931 ntBASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDH11XQ9BZA7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH11XQ9BZA7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 AC126915.1-201ENST00000522847 1038 ntBASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PCDH11XQ9BZA7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH11XQ9BZA7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH11XQ9BZA7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH11XQ9BZA7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH11XQ9BZA7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH11XQ9BZA7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms