Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AP000845.1-201ENST00000581677 2131 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AL139400.1-201ENST00000366220 510 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 MTND6P24-201ENST00000440466 518 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AC023141.5-201ENST00000458585 616 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AC004835.2-201ENST00000603762 682 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AF228730.6-201ENST00000641497 218 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 AC084121.3-201ENST00000641716 218 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO3Q9BXY4 ACE3P-201ENST00000423435 1973 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AL390755.1-201ENST00000623716 2027 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC109322.1-201ENST00000524499 1264 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC025048.3-201ENST00000590609 569 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC005702.4-201ENST00000618393 416 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC007191.1-201ENST00000623179 2995 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 Z97205.2-201ENST00000564697 1639 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms