Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.33□□□□□ -0.27
PCGF1Q9BSM1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AL596087.1-201ENST00000400979 1969 ntBASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AC092580.3-201ENST00000430932 139 ntBASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 LINC02084-201ENST00000606069 1096 ntBASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AL138828.2-201ENST00000615812 383 ntBASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AL592424.1-201ENST00000563624 1536 ntBASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCGF1Q9BSM1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AC100757.3-201ENST00000622361 1406 ntBASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AC067930.6-201ENST00000623257 4947 ntBASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 AC026979.3-201ENST00000607315 403 ntBASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCGF1Q9BSM1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms