Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AC131009.4-201ENST00000624048 1740 ntBASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 LINC02447-202ENST00000501888 2146 ntBASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TPSP2-201ENST00000561760 610 ntBASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AP001350.2-201ENST00000625104 1094 ntBASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
AP1S3Q96PC3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.02□□□□□ -0.48
AP1S3Q96PC3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 RCN1P1-201ENST00000400413 996 ntBASIC12.02□□□□□ -0.49
AP1S3Q96PC3 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.02□□□□□ -0.49
AP1S3Q96PC3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 MIR4492-201ENST00000581627 80 ntBASIC12.02□□□□□ -0.49
AP1S3Q96PC3 AC092329.2-201ENST00000598402 547 ntBASIC12.02□□□□□ -0.49
AP1S3Q96PC3 AC020765.3-201ENST00000613051 740 ntBASIC12.02□□□□□ -0.49
AP1S3Q96PC3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms