Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MEP1AP4-201ENST00000423244 1087 ntBASIC16.25■□□□□ 0.19
RPRD1AQ96P16 DFFBP1-201ENST00000433250 979 ntBASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 AC190387.1-201ENST00000551683 408 ntBASIC16.25■□□□□ 0.19
RPRD1AQ96P16 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPRD1AQ96P16 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.24■□□□□ 0.19
RPRD1AQ96P16 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms