Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 MIR648-201ENST00000385046 94 ntBASIC12.86□□□□□ -0.35
ZNF48Q96MX3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AC022210.1-201ENST00000449856 793 ntBASIC12.86□□□□□ -0.35
ZNF48Q96MX3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 MIR6805-201ENST00000615055 62 ntBASIC12.86□□□□□ -0.35
ZNF48Q96MX3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AL592424.1-201ENST00000563624 1536 ntBASIC12.86□□□□□ -0.35
ZNF48Q96MX3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF48Q96MX3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AC004987.2-201ENST00000395959 1148 ntBASIC12.85□□□□□ -0.35
ZNF48Q96MX3 RPS2P32-201ENST00000439199 892 ntBASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AL512343.1-201ENST00000605837 169 ntBASIC12.85□□□□□ -0.35
ZNF48Q96MX3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AL033527.5-201ENST00000641382 801 ntBASIC12.85□□□□□ -0.35
ZNF48Q96MX3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms