Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 MIR326-201ENST00000362220 95 ntBASIC16.08■□□□□ 0.16
SMARCD2Q92925 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AHCYP2-201ENST00000430630 1300 ntBASIC16.08■□□□□ 0.16
SMARCD2Q92925 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SMARCD2Q92925 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMARCD2Q92925 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AC006033.1-201ENST00000440505 426 ntBASIC16.07■□□□□ 0.16
SMARCD2Q92925 Z93015.1-201ENST00000451718 390 ntBASIC16.07■□□□□ 0.16
SMARCD2Q92925 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 RNA5SP486-201ENST00000515961 83 ntBASIC16.07■□□□□ 0.16
SMARCD2Q92925 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.07■□□□□ 0.16
SMARCD2Q92925 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMARCD2Q92925 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SMARCD2Q92925 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMARCD2Q92925 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms