Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 RPL13P2-201ENST00000440687 659 ntBASIC26.87■■□□□ 1.89
TRIM41Q8WV44 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 ATF5-205ENST00000600336 682 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 PRKN-211ENST00000615065 261 ntTSL 5 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM41Q8WV44 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 BX284668.4-201ENST00000453917 508 ntBASIC26.86■■□□□ 1.89
TRIM41Q8WV44 VILL-207ENST00000465644 1857 ntTSL 5 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 KC6-205ENST00000599934 556 ntTSL 4 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 AL450472.2-201ENST00000603663 1156 ntBASIC26.86■■□□□ 1.89
TRIM41Q8WV44 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC26.86■■□□□ 1.89
TRIM41Q8WV44 BLK-205ENST00000529894 2017 ntTSL 5 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 CYP2T1P-202ENST00000641596 2535 ntBASIC26.85■■□□□ 1.89
TRIM41Q8WV44 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 AC069224.1-201ENST00000566372 1715 ntBASIC26.85■■□□□ 1.89
TRIM41Q8WV44 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 MAGEA5-201ENST00000446757 942 ntBASIC26.85■■□□□ 1.89
TRIM41Q8WV44 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 AP000812.2-201ENST00000538934 718 ntBASIC26.85■■□□□ 1.89
TRIM41Q8WV44 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 AC097359.3-201ENST00000603982 1210 ntBASIC26.85■■□□□ 1.89
TRIM41Q8WV44 AL008638.5-201ENST00000623814 1298 ntBASIC26.85■■□□□ 1.89
TRIM41Q8WV44 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 GRN-222ENST00000639447 1314 ntTSL 2 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM41Q8WV44 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 AC011477.6-201ENST00000604980 1927 ntBASIC26.84■■□□□ 1.89
TRIM41Q8WV44 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 OLR1-203ENST00000432556 950 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 MIR3147-201ENST00000577811 66 ntBASIC26.84■■□□□ 1.89
TRIM41Q8WV44 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC26.84■■□□□ 1.89
TRIM41Q8WV44 CLK3P2-201ENST00000427566 1453 ntBASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms