Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AP001282.1-201ENST00000531301 1499 ntBASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 C18orf15-201ENST00000623680 2534 ntBASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 IGLL3P-201ENST00000412472 434 ntBASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AL009183.1-201ENST00000603760 355 ntBASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AC064836.3-201ENST00000607928 673 ntBASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AL078644.1-201ENST00000609881 752 ntBASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIK3C3Q8NEB9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIK3C3Q8NEB9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms