Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 FAM207CP-201ENST00000443486 507 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC023310.3-201ENST00000557027 670 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC100756.1-201ENST00000562736 682 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC138749.3-201ENST00000567691 622 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 LINC02560-201ENST00000596379 459 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC116165.1-201ENST00000611806 668 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC009118.2-201ENST00000613275 655 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AL121723.1-201ENST00000445194 1519 ntBASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC236430.1-201ENST00000402231 743 ntBASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC002472.2-201ENST00000442739 958 ntBASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 MIR4745-201ENST00000577608 62 ntBASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC015910.1-201ENST00000579400 975 ntBASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AC008761.3-201ENST00000624803 892 ntBASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC4Q8N9L1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC4Q8N9L1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms