Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 API5-211ENST00000534695 560 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAM1L1Q8N609 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 CLK3P2-201ENST00000427566 1453 ntBASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 CRB3P1-201ENST00000449338 276 ntBASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 RN7SL399P-201ENST00000471648 279 ntBASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAM1L1Q8N609 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 AC105250.1-201ENST00000509378 2057 ntBASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 AC140912.1-201ENST00000577171 1054 ntBASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 SPDYE22P-201ENST00000582158 798 ntBASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 AC093726.1-201ENST00000608064 963 ntBASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRAM1L1Q8N609 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms