Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 PTGER4P3-201ENST00000458150 252 ntBASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LTBP4Q8N2S1 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 JPT2-203ENST00000382711 894 ntTSL 4 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC21.11■□□□□ 0.97
LTBP4Q8N2S1 AC067852.2-201ENST00000590513 2313 ntBASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 NME6-208ENST00000435684 599 ntTSL 2 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTBP4Q8N2S1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 AC106827.1-201ENST00000366454 431 ntBASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 RNA5SP417-201ENST00000516459 108 ntBASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LTBP4Q8N2S1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms