Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 FOXO1B-201ENST00000504678 1527 ntBASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC36Q8IYA8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 KRT18P28-201ENST00000453838 1332 ntBASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 AC026150.2-201ENST00000564693 1156 ntBASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC36Q8IYA8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AL035456.1-201ENST00000456064 1369 ntBASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 ALOX12P2-203ENST00000570921 1945 ntBASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 GPS2P2-201ENST00000430745 888 ntBASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AC069262.1-201ENST00000539058 672 ntBASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.22□□□□□ -0.13
CCDC36Q8IYA8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms