Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 AL133267.1-201ENST00000398220 340 ntBASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NPAS3Q8IXF0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 MIR1247-201ENST00000408206 136 ntBASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 FAM86HP-204ENST00000513466 959 ntBASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 ZNF767P-206ENST00000513792 565 ntBASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 MIR3615-201ENST00000581999 87 ntBASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 AC091271.1-201ENST00000611877 1162 ntBASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS3Q8IXF0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 GPAA1P2-201ENST00000417923 928 ntBASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 C2orf69P2-201ENST00000562032 1123 ntBASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms