Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 BNIP3P1-202ENST00000550043 1585 ntBASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AC134407.2-201ENST00000625089 1978 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AC007541.1-201ENST00000570282 1469 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AC114501.2-201ENST00000439631 535 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 DOC2GP-202ENST00000514950 1163 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AL132655.2-201ENST00000596276 594 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AC074044.1-201ENST00000609673 707 ntBASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM48Q8IWZ4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 SPDYE19P-201ENST00000338590 713 ntBASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 AZGP1P1-201ENST00000411909 902 ntBASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 CRB3P1-201ENST00000449338 276 ntBASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms