Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 AL627223.1-201ENST00000416693 442 ntBASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 GPS2P2-201ENST00000430745 888 ntBASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 AC105021.1-202ENST00000570572 669 ntBASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 KRT8P44-201ENST00000441609 1350 ntBASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 YBX1P5-201ENST00000509441 847 ntBASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC83Q8IWF9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 AL353705.2-201ENST00000428243 662 ntBASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 RBPMS2P1-201ENST00000437762 623 ntBASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 AC010327.4-202ENST00000591484 748 ntBASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 AC018529.1-201ENST00000613063 361 ntBASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms