Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL589702.1-201ENST00000641229 1509 ntBASIC14.35□□□□□ -0.11
SHFQ7M4L6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 LINC00528-201ENST00000600723 2160 ntBASIC14.34□□□□□ -0.11
SHFQ7M4L6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 AP001282.1-201ENST00000531301 1499 ntBASIC14.34□□□□□ -0.11
SHFQ7M4L6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 MIR4321-201ENST00000592276 80 ntBASIC14.34□□□□□ -0.11
SHFQ7M4L6 Z83851.2-201ENST00000609564 659 ntBASIC14.34□□□□□ -0.11
SHFQ7M4L6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SHFQ7M4L6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHFQ7M4L6 LINC00552-201ENST00000625151 2579 ntBASIC14.33□□□□□ -0.11
SHFQ7M4L6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.33□□□□□ -0.11
SHFQ7M4L6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHFQ7M4L6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHFQ7M4L6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHFQ7M4L6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHFQ7M4L6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHFQ7M4L6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 AC002347.1-201ENST00000569543 541 ntBASIC14.33□□□□□ -0.12
SHFQ7M4L6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SHFQ7M4L6 BCAR1-209ENST00000546196 1340 ntBASIC14.33□□□□□ -0.12
SHFQ7M4L6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHFQ7M4L6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms