Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 FAM220BP-201ENST00000377689 816 ntBASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 MIR943-201ENST00000401286 94 ntBASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 AC093724.1-201ENST00000448659 1027 ntBASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 AC069120.2-201ENST00000524091 540 ntBASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 AC140878.1-201ENST00000565277 250 ntBASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 AC005622.1-201ENST00000636801 1703 ntBASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 AL512638.1-201ENST00000457493 794 ntBASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 RNA5SP421-201ENST00000516864 134 ntBASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 GGT3P-204ENST00000453783 1664 ntBASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP1BQ7LBR1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms