Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 AL359075.1-203ENST00000462729 1002 ntBASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC00299Q6ZSB3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AC138969.3-201ENST00000546612 1459 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AC138932.2-201ENST00000548268 1459 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AC126755.4-201ENST00000549796 1459 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 PRYP5-201ENST00000451909 266 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AC092597.1-201ENST00000487352 616 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 RNF126P1-202ENST00000569893 925 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AC021097.1-201ENST00000607902 574 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AL592071.1-201ENST00000611956 408 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AL359736.2-201ENST00000621992 437 ntBASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00299Q6ZSB3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 AC118758.2-201ENST00000614242 2813 ntBASIC13.79□□□□□ -0.2
LINC00299Q6ZSB3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms