Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
H3F3CQ6NXT2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AL512384.1-201ENST00000406683 331 ntBASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 GIMAP3P-201ENST00000495150 836 ntBASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AC104596.2-201ENST00000512793 793 ntBASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AC092552.1-201ENST00000547243 906 ntBASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H3F3CQ6NXT2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 SLED1-202ENST00000512051 380 ntBASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H3F3CQ6NXT2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H3F3CQ6NXT2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.59□□□□□ -0.07
H3F3CQ6NXT2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms