Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 MARK2P5-201ENST00000507649 634 ntBASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 RERG-205ENST00000537647 935 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 INO80C-210ENST00000590757 595 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 PCBP2-OT1-201ENST00000634357 590 ntBASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 REXO1L4P-201ENST00000605109 1937 ntBASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 CRCP-204ENST00000398684 492 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 AC009955.4-201ENST00000597192 544 ntBASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 ATP6V0CP2-201ENST00000469409 207 ntBASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 MESTP3-201ENST00000503460 968 ntBASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 CSH2-206ENST00000560142 749 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 AC128714.1-201ENST00000637035 887 ntBASIC23.28■■□□□ 1.32
CDC42BPAQ5VT25 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 AP000593.2-201ENST00000542775 1433 ntBASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 RN7SL769P-201ENST00000469386 295 ntBASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 AL160314.3-201ENST00000556041 767 ntBASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 NAT9-224ENST00000583757 583 ntTSL 3 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPAQ5VT25 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CDC42BPAQ5VT25 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CDC42BPAQ5VT25 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CDC42BPAQ5VT25 AL662844.4-201ENST00000606367 2838 ntBASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 HLA-DQB2-229ENST00000411527 1059 ntBASIC23.26■■□□□ 1.31
CDC42BPAQ5VT25 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms