Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AC100757.4-201ENST00000626934 759 ntBASIC19.53■□□□□ 0.72
RC3H1Q5TC82 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RC3H1Q5TC82 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 MIR33B-201ENST00000385104 96 ntBASIC19.52■□□□□ 0.72
RC3H1Q5TC82 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 AC022616.1-201ENST00000518688 554 ntBASIC19.52■□□□□ 0.72
RC3H1Q5TC82 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 KRT8P4-201ENST00000509735 1454 ntBASIC19.52■□□□□ 0.72
RC3H1Q5TC82 HTR7P1-202ENST00000624664 4411 ntBASIC19.52■□□□□ 0.72
RC3H1Q5TC82 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.52■□□□□ 0.72
RC3H1Q5TC82 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
RC3H1Q5TC82 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.52■□□□□ 0.71
RC3H1Q5TC82 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.52■□□□□ 0.71
RC3H1Q5TC82 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 AL136309.1-201ENST00000403917 691 ntBASIC19.51■□□□□ 0.71
RC3H1Q5TC82 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.51■□□□□ 0.71
RC3H1Q5TC82 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 MIR3907-201ENST00000579424 151 ntBASIC19.51■□□□□ 0.71
RC3H1Q5TC82 RN7SL574P-201ENST00000581512 297 ntBASIC19.51■□□□□ 0.71
RC3H1Q5TC82 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.51■□□□□ 0.71
RC3H1Q5TC82 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 KRT8P29-201ENST00000420409 1371 ntBASIC19.5■□□□□ 0.71
RC3H1Q5TC82 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 AC005740.2-201ENST00000511085 419 ntBASIC19.5■□□□□ 0.71
RC3H1Q5TC82 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 AC134698.3-201ENST00000523880 214 ntBASIC19.5■□□□□ 0.71
RC3H1Q5TC82 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 AC124067.4-201ENST00000519691 2379 ntBASIC19.5■□□□□ 0.71
RC3H1Q5TC82 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RC3H1Q5TC82 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms