Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 TUBB3P1-201ENST00000405796 1332 ntBASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 SPDYE7P-202ENST00000420373 878 ntBASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 CNN2P2-201ENST00000443536 909 ntBASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 CNN2P3-201ENST00000450201 906 ntBASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 AL136317.3-201ENST00000618497 906 ntBASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AL109954.1-202ENST00000564051 2148 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 DUX4L27-201ENST00000554796 1261 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AL365330.1-201ENST00000607459 531 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AC007967.4-201ENST00000614700 386 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AC093512.1-201ENST00000617969 520 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 AC005089.1-201ENST00000619486 2241 ntBASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.03■□□□□ 0.16
KHDC1Q4VXA5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.02■□□□□ 0.16
KHDC1Q4VXA5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms