Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.35■□□□□ 0.37
UBXN1Q04323 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.35■□□□□ 0.37
UBXN1Q04323 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.35■□□□□ 0.37
UBXN1Q04323 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.35■□□□□ 0.37
UBXN1Q04323 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.35■□□□□ 0.37
UBXN1Q04323 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
UBXN1Q04323 AC092902.6-201ENST00000641783 218 ntBASIC17.35■□□□□ 0.37
UBXN1Q04323 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
UBXN1Q04323 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
UBXN1Q04323 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 KRT8P37-201ENST00000451609 1420 ntBASIC17.35■□□□□ 0.37
UBXN1Q04323 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBXN1Q04323 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 CYP4F24P-201ENST00000586049 1580 ntBASIC17.35■□□□□ 0.37
UBXN1Q04323 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.35■□□□□ 0.37
UBXN1Q04323 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.35■□□□□ 0.37
UBXN1Q04323 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBXN1Q04323 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 AC106881.1-201ENST00000605849 3329 ntBASIC17.34■□□□□ 0.37
UBXN1Q04323 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.34■□□□□ 0.37
UBXN1Q04323 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.34■□□□□ 0.37
UBXN1Q04323 FAM58CP-201ENST00000435741 640 ntBASIC17.34■□□□□ 0.37
UBXN1Q04323 PHKG1P2-201ENST00000457537 863 ntBASIC17.34■□□□□ 0.37
UBXN1Q04323 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 RN7SL589P-201ENST00000481268 310 ntBASIC17.34■□□□□ 0.37
UBXN1Q04323 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 AC243562.1-201ENST00000560672 389 ntBASIC17.34■□□□□ 0.37
UBXN1Q04323 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.34■□□□□ 0.37
UBXN1Q04323 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.34■□□□□ 0.37
UBXN1Q04323 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.34■□□□□ 0.37
UBXN1Q04323 FAM197Y3-203ENST00000618346 717 ntBASIC17.34■□□□□ 0.37
UBXN1Q04323 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBXN1Q04323 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UBXN1Q04323 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBXN1Q04323 PCDHA3-202ENST00000532566 4594 ntBASIC17.33■□□□□ 0.37
UBXN1Q04323 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.33■□□□□ 0.37
UBXN1Q04323 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 AGAP7P-201ENST00000582299 2062 ntBASIC17.33■□□□□ 0.37
UBXN1Q04323 AGAP14-201ENST00000624701 2060 ntBASIC17.33■□□□□ 0.37
UBXN1Q04323 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBXN1Q04323 AC126365.1-201ENST00000578585 1514 ntBASIC17.33■□□□□ 0.37
UBXN1Q04323 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.33■□□□□ 0.37
UBXN1Q04323 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
UBXN1Q04323 MIR346-201ENST00000362234 95 ntBASIC17.33■□□□□ 0.36
UBXN1Q04323 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.33■□□□□ 0.36
UBXN1Q04323 AL139010.1-201ENST00000454878 894 ntBASIC17.33■□□□□ 0.36
UBXN1Q04323 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.33■□□□□ 0.36
UBXN1Q04323 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.33■□□□□ 0.36
UBXN1Q04323 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.33■□□□□ 0.36
UBXN1Q04323 AC106730.1-201ENST00000566722 1090 ntBASIC17.33■□□□□ 0.36
UBXN1Q04323 AP000842.3-202ENST00000569238 1080 ntBASIC17.33■□□□□ 0.36
UBXN1Q04323 BX640515.1-201ENST00000617215 977 ntBASIC17.33■□□□□ 0.36
UBXN1Q04323 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.33■□□□□ 0.36
UBXN1Q04323 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBXN1Q04323 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms