Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
USP46P62068 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.63■□□□□ 0.25
USP46P62068 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.63■□□□□ 0.25
USP46P62068 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USP46P62068 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 AC026691.1-201ENST00000602502 2017 ntBASIC16.62■□□□□ 0.25
USP46P62068 AC007950.2-201ENST00000615045 2347 ntBASIC16.62■□□□□ 0.25
USP46P62068 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 SSR1P1-201ENST00000407630 814 ntBASIC16.62■□□□□ 0.25
USP46P62068 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.62■□□□□ 0.25
USP46P62068 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
USP46P62068 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.62■□□□□ 0.25
USP46P62068 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 CR383656.12-201ENST00000549567 513 ntBASIC16.62■□□□□ 0.25
USP46P62068 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.62■□□□□ 0.25
USP46P62068 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.62■□□□□ 0.25
USP46P62068 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.62■□□□□ 0.25
USP46P62068 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 AC011477.6-201ENST00000604980 1927 ntBASIC16.62■□□□□ 0.25
USP46P62068 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP46P62068 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.62■□□□□ 0.25
USP46P62068 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.62■□□□□ 0.25
USP46P62068 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USP46P62068 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 CLK3P2-201ENST00000427566 1453 ntBASIC16.61■□□□□ 0.25
USP46P62068 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
USP46P62068 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
USP46P62068 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.61■□□□□ 0.25
USP46P62068 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.61■□□□□ 0.25
USP46P62068 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.61■□□□□ 0.25
USP46P62068 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.61■□□□□ 0.25
USP46P62068 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.61■□□□□ 0.25
USP46P62068 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.61■□□□□ 0.25
USP46P62068 AC093726.1-201ENST00000608064 963 ntBASIC16.61■□□□□ 0.25
USP46P62068 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
USP46P62068 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.61■□□□□ 0.25
USP46P62068 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.61■□□□□ 0.25
USP46P62068 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
USP46P62068 CU639417.3-201ENST00000624240 1404 ntBASIC16.61■□□□□ 0.25
USP46P62068 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP46P62068 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP46P62068 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP46P62068 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.6■□□□□ 0.25
USP46P62068 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP46P62068 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
USP46P62068 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP46P62068 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP46P62068 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms