Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.22□□□□□ -0.13
VBP1P61758 AC134407.2-201ENST00000625089 1978 ntBASIC14.22□□□□□ -0.13
VBP1P61758 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 AC067750.1-201ENST00000608826 6545 ntBASIC14.22□□□□□ -0.13
VBP1P61758 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 LIN28AP1-201ENST00000429574 405 ntBASIC14.22□□□□□ -0.13
VBP1P61758 ATP5G1P1-201ENST00000448724 379 ntBASIC14.22□□□□□ -0.13
VBP1P61758 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 AC064862.7-201ENST00000604520 867 ntBASIC14.22□□□□□ -0.13
VBP1P61758 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.22□□□□□ -0.13
VBP1P61758 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.22□□□□□ -0.13
VBP1P61758 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.22□□□□□ -0.13
VBP1P61758 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
VBP1P61758 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VBP1P61758 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
VBP1P61758 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.21□□□□□ -0.13
VBP1P61758 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 RCN1P2-201ENST00000398357 915 ntBASIC14.21□□□□□ -0.13
VBP1P61758 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.21□□□□□ -0.13
VBP1P61758 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.21□□□□□ -0.13
VBP1P61758 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.21□□□□□ -0.13
VBP1P61758 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.21□□□□□ -0.13
VBP1P61758 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 WASH6P-202ENST00000359512 1437 ntBASIC14.21□□□□□ -0.13
VBP1P61758 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.21□□□□□ -0.13
VBP1P61758 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VBP1P61758 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VBP1P61758 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.21□□□□□ -0.14
VBP1P61758 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
VBP1P61758 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VBP1P61758 DGCR9-201ENST00000609630 2415 ntBASIC14.21□□□□□ -0.14
VBP1P61758 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VBP1P61758 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VBP1P61758 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VBP1P61758 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VBP1P61758 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VBP1P61758 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
VBP1P61758 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.2□□□□□ -0.14
VBP1P61758 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.2□□□□□ -0.14
VBP1P61758 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VBP1P61758 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms