Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SPCS3P61009 CICP23-201ENST00000605013 2741 ntBASIC12.95□□□□□ -0.34
SPCS3P61009 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 AL356585.2-201ENST00000625078 2396 ntBASIC12.94□□□□□ -0.34
SPCS3P61009 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 AL589702.1-201ENST00000641229 1509 ntBASIC12.94□□□□□ -0.34
SPCS3P61009 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 FAM197Y8-203ENST00000450145 560 ntBASIC12.94□□□□□ -0.34
SPCS3P61009 AC018712.1-201ENST00000455767 687 ntBASIC12.94□□□□□ -0.34
SPCS3P61009 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.94□□□□□ -0.34
SPCS3P61009 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.94□□□□□ -0.34
SPCS3P61009 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.94□□□□□ -0.34
SPCS3P61009 AC012640.2-201ENST00000561606 901 ntBASIC12.94□□□□□ -0.34
SPCS3P61009 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 AL009183.1-201ENST00000603760 355 ntBASIC12.94□□□□□ -0.34
SPCS3P61009 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
SPCS3P61009 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SPCS3P61009 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPCS3P61009 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.94□□□□□ -0.34
SPCS3P61009 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 AC105250.1-201ENST00000509378 2057 ntBASIC12.93□□□□□ -0.34
SPCS3P61009 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
SPCS3P61009 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.93□□□□□ -0.34
SPCS3P61009 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms