Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
MCCD1P59942 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MCCD1P59942 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MCCD1P59942 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MCCD1P59942 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 AP003680.1-201ENST00000598970 3660 ntBASIC16.76■□□□□ 0.27
MCCD1P59942 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.76■□□□□ 0.27
MCCD1P59942 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MCCD1P59942 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MCCD1P59942 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.76■□□□□ 0.27
MCCD1P59942 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 BCRP1-201ENST00000444246 691 ntBASIC16.76■□□□□ 0.27
MCCD1P59942 FAM86LP-201ENST00000478302 853 ntBASIC16.76■□□□□ 0.27
MCCD1P59942 INGX-202ENST00000489074 768 ntBASIC16.76■□□□□ 0.27
MCCD1P59942 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.76■□□□□ 0.27
MCCD1P59942 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.76■□□□□ 0.27
MCCD1P59942 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.76■□□□□ 0.27
MCCD1P59942 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.76■□□□□ 0.27
MCCD1P59942 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.76■□□□□ 0.27
MCCD1P59942 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.76■□□□□ 0.27
MCCD1P59942 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
MCCD1P59942 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.76■□□□□ 0.27
MCCD1P59942 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 AL391825.1-201ENST00000457671 1364 ntBASIC16.76■□□□□ 0.27
MCCD1P59942 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MCCD1P59942 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MCCD1P59942 SPDYE19P-201ENST00000338590 713 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.75■□□□□ 0.27
MCCD1P59942 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 DFFBP1-201ENST00000433250 979 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.75■□□□□ 0.27
MCCD1P59942 GNAQP1-201ENST00000444815 1067 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 SERBP1P5-201ENST00000510079 1181 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.75■□□□□ 0.27
MCCD1P59942 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.75■□□□□ 0.27
MCCD1P59942 TPRX2P-201ENST00000535362 881 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
MCCD1P59942 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.75■□□□□ 0.27
MCCD1P59942 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MCCD1P59942 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.75■□□□□ 0.27
MCCD1P59942 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MCCD1P59942 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.75■□□□□ 0.27
MCCD1P59942 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.75■□□□□ 0.27
MCCD1P59942 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.75■□□□□ 0.27
MCCD1P59942 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.74■□□□□ 0.27
MCCD1P59942 CICP11-201ENST00000434745 2827 ntBASIC16.74■□□□□ 0.27
MCCD1P59942 AGAP7P-201ENST00000582299 2062 ntBASIC16.74■□□□□ 0.27
MCCD1P59942 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MCCD1P59942 AGAP14-201ENST00000624701 2060 ntBASIC16.74■□□□□ 0.27
MCCD1P59942 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MCCD1P59942 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MCCD1P59942 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MCCD1P59942 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MCCD1P59942 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.74■□□□□ 0.27
MCCD1P59942 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms