Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.58■□□□□ 0.89
RIPK4P57078 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.58■□□□□ 0.88
RIPK4P57078 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RIPK4P57078 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
RIPK4P57078 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK4P57078 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK4P57078 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK4P57078 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK4P57078 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RIPK4P57078 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK4P57078 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RIPK4P57078 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK4P57078 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 AL133267.1-201ENST00000398220 340 ntBASIC20.57■□□□□ 0.88
RIPK4P57078 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RIPK4P57078 RN7SL692P-201ENST00000464677 288 ntBASIC20.57■□□□□ 0.88
RIPK4P57078 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.57■□□□□ 0.88
RIPK4P57078 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK4P57078 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.57■□□□□ 0.88
RIPK4P57078 AC000095.1-201ENST00000603208 874 ntBASIC20.57■□□□□ 0.88
RIPK4P57078 TMEM261P1-201ENST00000604899 340 ntBASIC20.57■□□□□ 0.88
RIPK4P57078 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
RIPK4P57078 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPK4P57078 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RIPK4P57078 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RIPK4P57078 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.57■□□□□ 0.88
RIPK4P57078 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPK4P57078 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK4P57078 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK4P57078 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RIPK4P57078 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK4P57078 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK4P57078 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.56■□□□□ 0.88
RIPK4P57078 AC104596.2-201ENST00000512793 793 ntBASIC20.56■□□□□ 0.88
RIPK4P57078 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.56■□□□□ 0.88
RIPK4P57078 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 AC092552.1-201ENST00000547243 906 ntBASIC20.56■□□□□ 0.88
RIPK4P57078 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.56■□□□□ 0.88
RIPK4P57078 AC015910.1-201ENST00000579400 975 ntBASIC20.56■□□□□ 0.88
RIPK4P57078 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.56■□□□□ 0.88
RIPK4P57078 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.56■□□□□ 0.88
RIPK4P57078 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RIPK4P57078 AC103702.1-201ENST00000548801 2630 ntBASIC20.56■□□□□ 0.88
RIPK4P57078 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 AC132872.4-202ENST00000622924 2756 ntBASIC20.55■□□□□ 0.88
RIPK4P57078 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.55■□□□□ 0.88
RIPK4P57078 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.55■□□□□ 0.88
RIPK4P57078 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.55■□□□□ 0.88
RIPK4P57078 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
RIPK4P57078 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 AC105250.1-201ENST00000509378 2057 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms