Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 RNA5SP410-201ENST00000516285 106 ntBASIC13.17□□□□□ -0.3
RIPPLY3P57055 AC012158.2-201ENST00000536546 354 ntBASIC13.17□□□□□ -0.3
RIPPLY3P57055 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 KRT8P12-202ENST00000472924 1397 ntBASIC13.17□□□□□ -0.3
RIPPLY3P57055 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 RPSAP31-201ENST00000416648 895 ntBASIC13.16□□□□□ -0.3
RIPPLY3P57055 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 RN7SL181P-201ENST00000462921 277 ntBASIC13.16□□□□□ -0.3
RIPPLY3P57055 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 AC036164.1-201ENST00000570544 333 ntBASIC13.16□□□□□ -0.3
RIPPLY3P57055 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.16□□□□□ -0.3
RIPPLY3P57055 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.16□□□□□ -0.3
RIPPLY3P57055 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 AC100803.2-201ENST00000562459 1963 ntBASIC13.16□□□□□ -0.3
RIPPLY3P57055 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RIPPLY3P57055 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIPPLY3P57055 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AC012317.2-201ENST00000623305 2251 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 FOXO1B-201ENST00000504678 1527 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms