Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDH12P55289 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDH12P55289 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDH12P55289 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH12P55289 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDH12P55289 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 GPX1P2-201ENST00000429271 606 ntBASIC14.78□□□□□ -0.04
CDH12P55289 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH12P55289 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.78□□□□□ -0.04
CDH12P55289 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 RARRES2P8-201ENST00000566335 367 ntBASIC14.78□□□□□ -0.04
CDH12P55289 AL138918.1-201ENST00000568306 659 ntBASIC14.78□□□□□ -0.04
CDH12P55289 FAM197Y3-203ENST00000618346 717 ntBASIC14.78□□□□□ -0.04
CDH12P55289 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CDH12P55289 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH12P55289 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH12P55289 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH12P55289 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH12P55289 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH12P55289 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH12P55289 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH12P55289 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH12P55289 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH12P55289 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CDH12P55289 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH12P55289 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH12P55289 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH12P55289 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH12P55289 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH12P55289 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDH12P55289 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 AC018892.3-201ENST00000623986 2499 ntBASIC14.77□□□□□ -0.05
CDH12P55289 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH12P55289 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH12P55289 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.77□□□□□ -0.05
CDH12P55289 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH12P55289 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms