Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPS15P9-201ENST00000494093 319 ntBASIC15.08■□□□□ 0
NR1H2P55055 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.08■□□□□ 0
NR1H2P55055 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.08■□□□□ 0
NR1H2P55055 MIR4751-201ENST00000578027 74 ntBASIC15.08■□□□□ 0
NR1H2P55055 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.08■□□□□ 0
NR1H2P55055 AC008667.4-201ENST00000607370 168 ntBASIC15.08■□□□□ 0
NR1H2P55055 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.08■□□□□ 0
NR1H2P55055 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 AGAP7P-201ENST00000582299 2062 ntBASIC15.08■□□□□ 0
NR1H2P55055 AGAP14-201ENST00000624701 2060 ntBASIC15.08■□□□□ 0
NR1H2P55055 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.08■□□□□ 0
NR1H2P55055 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.08■□□□□ 0
NR1H2P55055 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
NR1H2P55055 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
NR1H2P55055 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 BEND3P1-201ENST00000421591 1944 ntBASIC15.07■□□□□ 0
NR1H2P55055 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 RPSAP43-201ENST00000402237 625 ntBASIC15.07■□□□□ 0
NR1H2P55055 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.07■□□□□ 0
NR1H2P55055 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.07■□□□□ 0
NR1H2P55055 IGHV3-65-201ENST00000523210 341 ntBASIC15.07■□□□□ 0
NR1H2P55055 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 AL805961.1-202ENST00000641562 540 ntBASIC15.07■□□□□ 0
NR1H2P55055 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 AC006504.5-208ENST00000588784 2401 ntBASIC15.07■□□□□ 0
NR1H2P55055 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.07■□□□□ 0
NR1H2P55055 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 AC006504.4-201ENST00000592118 1568 ntBASIC15.07■□□□□ 0
NR1H2P55055 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.07■□□□□ 0
NR1H2P55055 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H2P55055 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 FGD5P1-202ENST00000614866 2498 ntBASIC15.06■□□□□ 0
NR1H2P55055 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 2008.7 ms