Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDX1P52945 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDX1P52945 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDX1P52945 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PDX1P52945 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.33■□□□□ 0.05
PDX1P52945 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.33■□□□□ 0.05
PDX1P52945 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
PDX1P52945 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.33■□□□□ 0.05
PDX1P52945 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDX1P52945 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDX1P52945 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.33■□□□□ 0.05
PDX1P52945 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.33■□□□□ 0.04
PDX1P52945 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PDX1P52945 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.33■□□□□ 0.04
PDX1P52945 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.33■□□□□ 0.04
PDX1P52945 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.33■□□□□ 0.04
PDX1P52945 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.33■□□□□ 0.04
PDX1P52945 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
PDX1P52945 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PDX1P52945 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDX1P52945 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PDX1P52945 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.32■□□□□ 0.04
PDX1P52945 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.32■□□□□ 0.04
PDX1P52945 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.32■□□□□ 0.04
PDX1P52945 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.32■□□□□ 0.04
PDX1P52945 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.32■□□□□ 0.04
PDX1P52945 AC074338.1-201ENST00000416825 156 ntBASIC15.32■□□□□ 0.04
PDX1P52945 RPL13P2-201ENST00000440687 659 ntBASIC15.32■□□□□ 0.04
PDX1P52945 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.32■□□□□ 0.04
PDX1P52945 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.32■□□□□ 0.04
PDX1P52945 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PDX1P52945 AP005482.1-201ENST00000563722 1273 ntBASIC15.32■□□□□ 0.04
PDX1P52945 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.32■□□□□ 0.04
PDX1P52945 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.32■□□□□ 0.04
PDX1P52945 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PDX1P52945 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.32■□□□□ 0.04
PDX1P52945 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDX1P52945 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.31■□□□□ 0.04
PDX1P52945 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 AZGP1P1-201ENST00000411909 902 ntBASIC15.31■□□□□ 0.04
PDX1P52945 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 RN7SL399P-201ENST00000471648 279 ntBASIC15.31■□□□□ 0.04
PDX1P52945 AC104596.2-201ENST00000512793 793 ntBASIC15.31■□□□□ 0.04
PDX1P52945 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.31■□□□□ 0.04
PDX1P52945 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.31■□□□□ 0.04
PDX1P52945 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.31■□□□□ 0.04
PDX1P52945 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.31■□□□□ 0.04
PDX1P52945 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.31■□□□□ 0.04
PDX1P52945 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms