Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 AL136379.1-201ENST00000623471 2642 ntBASIC17.1■□□□□ 0.33
PDE6CP51160 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PDE6CP51160 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PDE6CP51160 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE6CP51160 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.1■□□□□ 0.33
PDE6CP51160 AC027369.6-201ENST00000525520 931 ntBASIC17.1■□□□□ 0.33
PDE6CP51160 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE6CP51160 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
PDE6CP51160 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PDE6CP51160 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.1■□□□□ 0.33
PDE6CP51160 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6CP51160 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6CP51160 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6CP51160 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 AC144831.1-201ENST00000573312 2656 ntBASIC17.09■□□□□ 0.33
PDE6CP51160 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE6CP51160 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 TERF1P3-201ENST00000505638 1227 ntBASIC17.09■□□□□ 0.33
PDE6CP51160 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6CP51160 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PDE6CP51160 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6CP51160 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6CP51160 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.09■□□□□ 0.33
PDE6CP51160 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 AC018892.3-201ENST00000623986 2499 ntBASIC17.09■□□□□ 0.33
PDE6CP51160 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6CP51160 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE6CP51160 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.09■□□□□ 0.33
PDE6CP51160 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE6CP51160 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.33
PDE6CP51160 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
PDE6CP51160 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.08■□□□□ 0.33
PDE6CP51160 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE6CP51160 AC099063.4-201ENST00000641099 1602 ntBASIC17.08■□□□□ 0.32
PDE6CP51160 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6CP51160 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PDE6CP51160 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 AC092580.3-201ENST00000430932 139 ntBASIC17.08■□□□□ 0.32
PDE6CP51160 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 TSPY16P-201ENST00000449843 468 ntBASIC17.08■□□□□ 0.32
PDE6CP51160 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE6CP51160 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE6CP51160 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE6CP51160 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6CP51160 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.08■□□□□ 0.32
PDE6CP51160 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PDE6CP51160 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms