Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5CP51148 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 AC023024.2-201ENST00000623561 1993 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RAB5CP51148 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5CP51148 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 AC098590.1-201ENST00000468126 897 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 AC092597.1-201ENST00000487352 616 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB5CP51148 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB5CP51148 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RAB5CP51148 MIR4785-201ENST00000585005 73 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 AL353135.1-201ENST00000606729 504 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 AL023973.1-201ENST00000624619 620 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB5CP51148 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 SIGLEC16-201ENST00000599858 1437 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5CP51148 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 AC092135.3-201ENST00000624151 1846 ntBASIC12.76□□□□□ -0.37
RAB5CP51148 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB5CP51148 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB5CP51148 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB5CP51148 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
RAB5CP51148 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB5CP51148 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB5CP51148 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5CP51148 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 AC246785.2-201ENST00000432512 513 ntBASIC12.75□□□□□ -0.37
RAB5CP51148 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB5CP51148 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5CP51148 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.75□□□□□ -0.37
RAB5CP51148 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB5CP51148 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB5CP51148 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB5CP51148 AL160237.2-201ENST00000556165 472 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms