Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF144AP50876 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF144AP50876 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF144AP50876 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RNF144AP50876 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RNF144AP50876 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 AC245100.5-201ENST00000452108 331 ntBASIC14.75□□□□□ -0.05
RNF144AP50876 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.75□□□□□ -0.05
RNF144AP50876 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF144AP50876 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 BANF1P1-201ENST00000553684 263 ntBASIC14.75□□□□□ -0.05
RNF144AP50876 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF144AP50876 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF144AP50876 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF144AP50876 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.75□□□□□ -0.05
RNF144AP50876 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF144AP50876 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF144AP50876 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 REXO1L1P-202ENST00000608646 1974 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 AC013268.4-201ENST00000637413 2228 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF144AP50876 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RNF144AP50876 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
RNF144AP50876 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 AL139400.1-201ENST00000366220 510 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF144AP50876 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RNF144AP50876 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF144AP50876 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF144AP50876 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF144AP50876 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF144AP50876 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 AC018529.1-201ENST00000613063 361 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 AC009093.7-201ENST00000623853 1223 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 AC084121.4-201ENST00000641598 221 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 AF228730.8-201ENST00000642140 221 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF144AP50876 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
RNF144AP50876 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 AP001282.1-201ENST00000531301 1499 ntBASIC14.74□□□□□ -0.05
RNF144AP50876 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
RNF144AP50876 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RNF144AP50876 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF144AP50876 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF144AP50876 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
RNF144AP50876 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF144AP50876 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF144AP50876 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms