Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.52■□□□□ 0.56
MRE11P49959 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MRE11P49959 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.52■□□□□ 0.56
MRE11P49959 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.52■□□□□ 0.56
MRE11P49959 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
MRE11P49959 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MRE11P49959 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 AC015922.1-201ENST00000421102 1152 ntBASIC18.52■□□□□ 0.56
MRE11P49959 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.52■□□□□ 0.56
MRE11P49959 CNN2P11-201ENST00000429351 262 ntBASIC18.52■□□□□ 0.56
MRE11P49959 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MRE11P49959 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.52■□□□□ 0.56
MRE11P49959 FGFR3P6-201ENST00000457012 610 ntBASIC18.52■□□□□ 0.56
MRE11P49959 AC091607.1-201ENST00000490318 1060 ntBASIC18.52■□□□□ 0.56
MRE11P49959 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.52■□□□□ 0.56
MRE11P49959 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.52■□□□□ 0.56
MRE11P49959 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.52■□□□□ 0.56
MRE11P49959 MIR4745-201ENST00000577608 62 ntBASIC18.52■□□□□ 0.56
MRE11P49959 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.52■□□□□ 0.56
MRE11P49959 AP001269.4-201ENST00000609611 512 ntBASIC18.52■□□□□ 0.56
MRE11P49959 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
MRE11P49959 AD001527.2-201ENST00000622994 785 ntBASIC18.52■□□□□ 0.56
MRE11P49959 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRE11P49959 BEND3P1-201ENST00000421591 1944 ntBASIC18.52■□□□□ 0.56
MRE11P49959 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
MRE11P49959 AL365209.1-201ENST00000624418 6473 ntBASIC18.52■□□□□ 0.55
MRE11P49959 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRE11P49959 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MRE11P49959 AL359183.1-201ENST00000623796 2132 ntBASIC18.52■□□□□ 0.55
MRE11P49959 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRE11P49959 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRE11P49959 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 AC007967.2-201ENST00000432613 625 ntBASIC18.51■□□□□ 0.55
MRE11P49959 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.51■□□□□ 0.55
MRE11P49959 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.51■□□□□ 0.55
MRE11P49959 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.51■□□□□ 0.55
MRE11P49959 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRE11P49959 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.51■□□□□ 0.55
MRE11P49959 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRE11P49959 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
MRE11P49959 AC140479.7-201ENST00000636301 2332 ntBASIC18.5■□□□□ 0.55
MRE11P49959 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRE11P49959 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.5■□□□□ 0.55
MRE11P49959 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
MRE11P49959 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MRE11P49959 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 AC009090.5-201ENST00000624886 2285 ntBASIC18.5■□□□□ 0.55
MRE11P49959 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRE11P49959 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.5■□□□□ 0.55
MRE11P49959 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.5■□□□□ 0.55
MRE11P49959 YBX1P5-201ENST00000509441 847 ntBASIC18.5■□□□□ 0.55
MRE11P49959 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MRE11P49959 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.5■□□□□ 0.55
MRE11P49959 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms