Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.94□□□□□ -0.18
CX3CR1P49238 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CX3CR1P49238 AC026979.3-201ENST00000607315 403 ntBASIC13.94□□□□□ -0.18
CX3CR1P49238 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.94□□□□□ -0.18
CX3CR1P49238 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.94□□□□□ -0.18
CX3CR1P49238 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.94□□□□□ -0.18
CX3CR1P49238 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.94□□□□□ -0.18
CX3CR1P49238 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.94□□□□□ -0.18
CX3CR1P49238 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CX3CR1P49238 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CX3CR1P49238 OR2I1P-209ENST00000641730 5365 ntBASIC13.93□□□□□ -0.18
CX3CR1P49238 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 CYP4F24P-201ENST00000586049 1580 ntBASIC13.93□□□□□ -0.18
CX3CR1P49238 AP3S2-216ENST00000617003 1561 ntBASIC13.93□□□□□ -0.18
CX3CR1P49238 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.93□□□□□ -0.18
CX3CR1P49238 CEND1P1-201ENST00000451006 455 ntBASIC13.93□□□□□ -0.18
CX3CR1P49238 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 ELL2P1-201ENST00000413990 1906 ntBASIC13.93□□□□□ -0.18
CX3CR1P49238 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 PCDHA3-202ENST00000532566 4594 ntBASIC13.93□□□□□ -0.18
CX3CR1P49238 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CR1P49238 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CX3CR1P49238 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CX3CR1P49238 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CX3CR1P49238 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms