Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
BRCC3P46736 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
BRCC3P46736 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 ENPP7P5-201ENST00000541031 1031 ntBASIC16.71■□□□□ 0.27
BRCC3P46736 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.71■□□□□ 0.27
BRCC3P46736 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.71■□□□□ 0.27
BRCC3P46736 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.71■□□□□ 0.27
BRCC3P46736 AC005252.2-201ENST00000624630 1141 ntBASIC16.71■□□□□ 0.27
BRCC3P46736 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.71■□□□□ 0.27
BRCC3P46736 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.71■□□□□ 0.26
BRCC3P46736 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BRCC3P46736 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.7■□□□□ 0.26
BRCC3P46736 BCRP2-202ENST00000447763 634 ntBASIC16.7■□□□□ 0.26
BRCC3P46736 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.7■□□□□ 0.26
BRCC3P46736 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.7■□□□□ 0.26
BRCC3P46736 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 BCRP6-201ENST00000510112 632 ntBASIC16.7■□□□□ 0.26
BRCC3P46736 BCRP7-201ENST00000511549 544 ntBASIC16.7■□□□□ 0.26
BRCC3P46736 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BRCC3P46736 AC026410.3-201ENST00000514280 936 ntBASIC16.7■□□□□ 0.26
BRCC3P46736 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.7■□□□□ 0.26
BRCC3P46736 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.7■□□□□ 0.26
BRCC3P46736 AC107373.2-201ENST00000607735 490 ntBASIC16.7■□□□□ 0.26
BRCC3P46736 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
BRCC3P46736 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BRCC3P46736 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BRCC3P46736 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRCC3P46736 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRCC3P46736 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRCC3P46736 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.69■□□□□ 0.26
BRCC3P46736 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BRCC3P46736 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.69■□□□□ 0.26
BRCC3P46736 AC068587.3-201ENST00000526613 355 ntBASIC16.69■□□□□ 0.26
BRCC3P46736 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.69■□□□□ 0.26
BRCC3P46736 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
BRCC3P46736 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.69■□□□□ 0.26
BRCC3P46736 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.69■□□□□ 0.26
BRCC3P46736 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.69■□□□□ 0.26
BRCC3P46736 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.69■□□□□ 0.26
BRCC3P46736 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
BRCC3P46736 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRCC3P46736 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms