Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 BASP1P1-201ENST00000430708 665 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 AC241585.1-201ENST00000433527 519 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 RN7SL618P-201ENST00000477850 296 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.94□□□□□ -0.34
CEACAM3P40198 RFPL4AP1-201ENST00000530883 850 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
CEACAM3P40198 AC093512.1-201ENST00000617969 520 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 SPDYE12P-201ENST00000618416 771 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 AC112504.1-201ENST00000623415 1841 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 HYMAI-201ENST00000635591 3347 ntBASIC12.94□□□□□ -0.34
CEACAM3P40198 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CEACAM3P40198 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.94□□□□□ -0.34
CEACAM3P40198 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CEACAM3P40198 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CEACAM3P40198 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CEACAM3P40198 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CEACAM3P40198 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CEACAM3P40198 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.93□□□□□ -0.34
CEACAM3P40198 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.93□□□□□ -0.34
CEACAM3P40198 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CEACAM3P40198 TREML5P-201ENST00000421694 576 ntBASIC12.93□□□□□ -0.34
CEACAM3P40198 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.93□□□□□ -0.34
CEACAM3P40198 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.93□□□□□ -0.34
CEACAM3P40198 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.93□□□□□ -0.34
CEACAM3P40198 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 RNA5SP421-201ENST00000516864 134 ntBASIC12.93□□□□□ -0.34
CEACAM3P40198 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.93□□□□□ -0.34
CEACAM3P40198 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CEACAM3P40198 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.93□□□□□ -0.34
CEACAM3P40198 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.93□□□□□ -0.34
CEACAM3P40198 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.93□□□□□ -0.34
CEACAM3P40198 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.93□□□□□ -0.34
CEACAM3P40198 AL138828.2-201ENST00000615812 383 ntBASIC12.93□□□□□ -0.34
CEACAM3P40198 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CEACAM3P40198 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms